rs10853289 chr18:322716 G>C
- Sequence
gggtctggaagaacatctgcagcg[G/C]agggtgcttcctataaacaatgac
- ASB in cell types
- BEAS-2B (bronchial epithelium) GM02255 (Lymphoblastoid Cell Lines) CD14+ monocytes erythroid progenitors
- ASB for transcription factors
- GCR_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.09 | 1.22 | 1.25 | n/a | No Hit | |||
| STAT1_HUMAN | 1.22 | -0.40 | 2.00 | 0.85 | Weak Discordant |
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Motif analysis
