rs10854179 chr20:37527967 A>C
- Sequence
gtctaccgcaaacgcctgatcaca[A/C]ggtccgaagtgggggctcatcctc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NRF1_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -1.52 | 1.51 | 5.00 | 0.13 | Weak Concordant | |||
| RBBP5_HUMAN | n/a | 2.50 | 3.00 | n/a | n/a |
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Motif analysis
