rs10857616 chr10:48656215 T>C
- Sequence
gagcagggccggggggatgcagcc[T/C]gggccccgcatcctcaggcaggac
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) T47D (invasive ductal carcinoma) RWPE2 RWPE1 (prostate epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN CATA_HUMAN PTEN_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.81 | 2.88 | 1.60 | n/a | No Hit | |||
| CATA_HUMAN | -3.01 | 3.06 | 1.00 | n/a | n/a | |||
| PTEN_HUMAN | -2.53 | 2.87 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.51 | 0.61 | 4.22 | n/a | n/a |
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