rs10859337 chr12:92552871 C>T
- Sequence
tagatgctgcatccctctccttga[C/T]cctcatctgaagcccaaccctatg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.75 | 0.69 | 1.02 |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, hdl cholesterol change with statins, obesity with early age of onset (age >2), total cholesterol