rs10859571 chr12:93763956 G>A

Sequence
aaataaacccgatttcttttggtt[G/A]ttctatcattcctgcagcccagaa
ASB in cell types
MS-1 (Small cell lung carcinoma) K562 (myelogenous leukemia) GM12890 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN -0.12 1.50 0.900.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP height ldl cholesterol change with statins mitral annular calcium obesity with early age of onset (age >2) parkinsons disease total cholesterol change with statins waist hip ratio
GTEx eQTL Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Mucosa Esophagus_Muscularis

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