rs10859579 chr12:93784722 A>G
- Sequence
tgatattagaacacagagtcccag[A/G]gtgatttactgtccagggggaaag
- ASB in cell types
- K562 (myelogenous leukemia) CWR22 (prostate carcinoma) TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- SMRC1_HUMAN PBX3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | 1.97 | 0.25 | 1.14 | n/a | n/a | |||
| PBX3_HUMAN | 1.84 | -1.17 | 1.00 | 0.91 | Weak Discordant |
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Motif analysis
