rs10859966 chr12:95859597 C>T

Sequence
ctccctaggaggtggaatttaact[C/T]gaagcctaagtgtcatgaaatacg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.69 0.73 0.290.02 1.04
K562 (myelogenous leukemia) 0.70 0.11 0.041.00 2.01
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP alzheimers disease chronic kidney disease ldl cholesterol total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous Breast_Mammary_Tissue Liver Lung Nerve_Tibial Skin_Sun_Exposed_Lower_leg Stomach Testis Thyroid

Download