rs10861400 chr12:105337653 T>C

Sequence
aaactatgtcaaaggccaggtctt[T/C]aggtttcacaatactgatgttatc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -0.55 2.09 1.000.01 1.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP infant head circumference,  mitral annular calcium,  triglycerides
GTEx eQTL Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Brain_Hippocampus,  Cells_Cultured_fibroblasts,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Prostate,  Testis

Download