rs10861954 chr12:108617681 T>G

Sequence
gcaggtgacttcacctagctctca[T/G]cctcagtttcatcttctgtaaaat
ASB in cell types
CD14+ monocytes
ASB for transcription factors
IKZF2_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 0.98 -1.01 9.9·10-41.00 1.00 n/a n/a
STAT1_HUMAN 2.06 -0.11 0.031.00 2.00 3.22 Discordant
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Motif analysis

STAT1_HUMAN Discordant
STAT1_HUMAN pic

Genetic associations

GRASP bipolar disorder,  hdl cholesterol,  hip bone mineral density (bmd),  paternal transmission distortion,  spine bone mineral density (bmd)
GTEx eQTL Heart_Atrial_Appendage,  Testis,  Whole_Blood

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