rs10862994 chr12:85554727 G>T
- Sequence
tgagtaataaaaacaacctagtat[G/T]gataaacctgacgtagagattatg
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.04 | 1.97 | 1.91 | n/a | No Hit | |||
| ANDR_HUMAN | -0.16 | 2.35 | 1.33 | 1.10 | Weak Concordant | |||
| HXB13_HUMAN | 2.21 | 0.00 | 1.83 | n/a | No Hit |
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Motif analysis
