rs10864790 chr1:230917317 A>G
- Sequence
gatgagaaacgaactaggtgaggc[A/G]aagtctggctgagtcccagccagc
- ASB in cell types
- HEK293 (embryonic kidney) T47D (invasive ductal carcinoma) IPSC-derived bipolar neuron
- ASB for transcription factors
- ZN654_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN654_HUMAN | 2.81 | -5.04 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), fasting insulin, height, hypertension (early onset hypertension), late onset alzheimers disease, ldl cholesterol, partial epilepsy, salmonella-induced pyroptosis, total cholesterol
GTEx eQTL Brain_Cerebellar_Hemisphere, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Heart_Atrial_Appendage, Lung, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood