rs10865138 chr2:38396392 T>C

Sequence
aggaatgtatttcttctaccatcc[T/C]ctacccacagacacacacacatcc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
P53_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P53_HUMAN 2.79 -0.96 0.021.00 1.50 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  birth weight,  diastolic blood pressure (dbp),  fasting blood glucose,  hdl cholesterol,  infant head circumference
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Esophagus_Mucosa,  Heart_Left_Ventricle,  Nerve_Tibial,  Pancreas,  Pituitary,  Spleen,  Testis

Download