rs10865666 chr3:66303698 T>C

Sequence
ctgtgtaatgaattaccacaactt[T/C]agtggtttaaggtgacatatattg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.79 0.41 4.7·10-31.00 1.18
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Motif analysis

No data available

Genetic associations

GRASP height,  mitral annular calcium,  waist hip ratio
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cortex,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Stomach,  Testis,  Thyroid

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