rs10866437 chr4:56642002 A>G
- Sequence
tccatcatgggaaaagaatgtgaa[A/G]tttcaaattatttgtattattacc
- ASB in cell types
- MCF10A (breast epithelial cells) PC3(bone mets prostate adenocarcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF10A (breast epithelial cells) | 2.36 | -1.88 | 1.00 | |||
| PC3(bone mets prostate adenocarcinoma) | -0.05 | 2.55 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Prostate, Thyroid, Uterus, Whole_Blood