rs10868787 chr9:88486736 A>G

Sequence
gacggggtttcaccatgttggtca[A/G]gctggtctcgaactactgacctca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ENL_HUMAN IKZF1_HUMAN ZN217_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ENL_HUMAN 2.53 -2.23 0.021.00 1.00 n/a n/a
IKZF1_HUMAN 2.03 -0.35 0.031.00 1.00 n/a n/a
ZN217_HUMAN 2.16 -1.83 0.041.00 1.00 n/a n/a
IKZF2_HUMAN 1.39 -0.95 0.051.00 1.00 n/a n/a
Items per page:
1 – 4 of 4

Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Whole_Blood

Download