rs10868789 chr9:88486917 G>A
- Sequence
tagaaacgtcaagctgatgaagtc[G/A]tttgttcttgtgtgcttctgtgat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NFAC3_HUMAN FOXK2_HUMAN ATF7_HUMAN ZN687_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFAC3_HUMAN | 2.09 | -1.83 | 1.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.41 | -2.01 | 1.00 | n/a | No Hit | |||
| ATF7_HUMAN | -1.57 | 1.88 | 1.00 | 4.76 | Concordant | |||
| ZN687_HUMAN | 1.75 | -1.49 | 1.00 | n/a | n/a | |||
| ZN592_HUMAN | 2.14 | -1.80 | 1.00 | n/a | n/a |
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Motif analysis
