rs10869066 chr9:71819321 G>A

Sequence
tgagaagaaaagcagcatcttctg[G/A]gcgcccccttgtggcttggattaa
ASB in cell types
HMEC (human mammary epithelial cells) CD34+ stem cells-derived erythroblasts spleen esophagus muscularis mucosa
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.66 1.04 1.003.8·10-4 1.22 0.45 Weak Concordant
STAG1_HUMAN 0.13 1.24 1.000.04 1.00 n/a n/a
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta Artery_Tibial Muscle_Skeletal

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