rs10870111 chr9:136703396 T>C
- Sequence
tcttgccgctctgacagtcacaga[T/C]gtgtaggtctcctgaccgcagctg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) RPMI8226 (Plasma cell myeloma) MM1.S (plasma cell myeloma) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- IKZF1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.87 | 0.01 | 1.67 | n/a | n/a | |||
| SPI1_HUMAN | 2.06 | -0.26 | 1.52 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood