rs10872479 chr6:137945111 G>A
- Sequence
tccttccaggcagtagctccacct[G/A]ctggaatagaaggaaactaatcag
- ASB in cell types
- neural cell K562 (myelogenous leukemia) A549 (lung carcinoma) WA09 (embryonic stem cells)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.59 | 0.00 | 1.18 | n/a | n/a | |||
| RAD21_HUMAN | 1.10 | 0.38 | 1.23 | n/a | n/a |
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