rs10876469 chr12:53626419 T>G
- Sequence
tcaactctcgcgagaagtcatggg[T/G]ccgcgggggaagggcgagatccgt
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) liver 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN CDK8_HUMAN BRCA1_HUMAN CHD2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.85 | 0.68 | 1.08 | n/a | No Hit | |||
| CDK8_HUMAN | 0.34 | 1.37 | 1.00 | n/a | n/a | |||
| BRCA1_HUMAN | 1.46 | -0.36 | 1.25 | n/a | n/a | |||
| CHD2_HUMAN | 1.12 | -0.35 | 1.20 | n/a | n/a |
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