rs10911205 chr1:183040142 C>A

Sequence
tgagtcagcagccttttaaccatg[C/A]ctgactgaagagaacttgtgtttg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN398_HUMAN FEZF1_HUMAN ZN362_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN398_HUMAN 2.74 -5.07 0.031.00 2.00 n/a n/a
FEZF1_HUMAN 1.28 -4.38 0.041.00 2.00 n/a No Hit
ZN362_HUMAN 3.03 -5.36 0.041.00 2.00 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

EMBL-EBI hypertriglyceridemia
GRASP body mass index (bmi),  colorectal tumors,  height,  microalbuminuria,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Amygdala,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Putamen_basal_ganglia,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Whole_Blood

Download