rs11086881 chr20:43547685 G>A
- Sequence
gcctcatgttggaatgcacacagt[G/A]tctgcttgtcttgctgttagcagc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN ARI4B_HUMAN ZN205_HUMAN THB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 2.25 | n/a | 1.50 | n/a | No Hit | |||
| ARI4B_HUMAN | 3.32 | -3.01 | 1.00 | n/a | n/a | |||
| ZN205_HUMAN | 3.27 | -3.61 | 1.00 | n/a | No Hit | |||
| THB_HUMAN | 2.02 | -3.08 | 1.50 | n/a | No Hit | |||
| ATF2_HUMAN | 2.48 | -2.16 | 1.00 | n/a | No Hit |
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Motif analysis
