rs11107404 chr12:94102340 T>C
- Sequence
gaaccaaaaaacaatgggtgggga[T/C]cgtctaaccagctcccttccctag
- ASB in cell types
- MDA-MB-231 (breast adenocarcinoma) HEK293 (embryonic kidney) hASC (preadipocytes) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- BRD4_HUMAN ZN692_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 0.21 | 1.91 | 1.00 | n/a | n/a | |||
| ZN692_HUMAN | n/a | 2.45 | 2.00 | 5.06 | Concordant | |||
| CTCF_HUMAN | 0.85 | 0.59 | 1.31 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
