rs11107617 chr12:94593963 A>C
- Sequence
ggctacagtgatgaaaatagacca[A/C]ccttacatgagcaccaattgcaag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SRF_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | 1.96 | -1.96 | 1.00 | 0.89 | Weak Discordant | |||
| MEF2B_HUMAN | 1.79 | -1.53 | 1.00 | n/a | No Hit |
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Motif analysis
