rs11108585 chr12:96571419 T>C

Sequence
ggcaagtccctttccatcgagatt[T/C]cttggctgagtccccgtgataggt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN ARI3A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.47 0.90 1.009.4·10-3 1.00 n/a n/a
ARI3A_HUMAN 2.39 -2.06 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

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