rs11109099 chr12:97536466 T>A
- Sequence
atttcatcaaccttctcattgttg[T/A]ctcttttggtttgtaaactctctg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells
- ASB for transcription factors
- FOXA1_HUMAN NCOA3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.34 | 2.87 | 2.62 | 4.39 | Concordant | |||
| NCOA3_HUMAN | n/a | 3.87 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP adiponectin levels, parkinsons disease, rheumatoid arthritis, waist hip ratio, years of education