rs11111097 chr12:101939931 G>A

Sequence
aaagtttagtagttcatgctgcct[G/A]gttattttcgcaatatgaacaaca
ASB in cell types
foreskin keratinocyte adult erythroblasts hepatocytes
ASB for transcription factors
CTCF_HUMAN KDM6A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.71 0.49 1.8·10-71.00 1.28 n/a No Hit
KDM6A_HUMAN 2.69 -4.93 6.0·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  triglycerides
GTEx eQTL Artery_Tibial,  Brain_Cortex,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Lung,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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