rs11111940 chr12:104235053 C>T

Sequence
gggggaaggtgttggatataagag[C/T]tcggagtcgcaaagaaaatgagca
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
SUMO2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SUMO2_HUMAN 1.76 0.29 0.011.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  serum creatinine
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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