rs11112903 chr12:106224339 T>C
- Sequence
tggcaattgcctctgagtggcacc[T/C]gattttcaggactgtcctgtggct
- ASB in cell types
- neutrophils neutrophils from periferal blood keratinocytes adult erythroblasts
- ASB for transcription factors
- SNAI2_HUMAN TCF21_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.12 | -1.66 | 1.50 | -3.99 | Concordant | |||
| TCF21_HUMAN | 2.28 | -1.54 | 2.00 | -3.47 | Concordant | |||
| STAT1_HUMAN | 2.15 | -1.19 | 3.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, alzheimers disease, cystatin c in serum, rheumatoid arthritis