rs11113626 chr12:107993081 A>G

Sequence
atgaagttatgagctaagtccagc[A/G]catttgctactggtatgcctggtg
ASB in cell types
neural cell MS-1 (Small cell lung carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
neural cell -0.29 0.97 1.006.5·10-3 1.00
MS-1 (Small cell lung carcinoma) -0.81 1.18 1.000.04 1.00
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol waist hip ratio
GTEx eQTL Adipose_Subcutaneous Brain_Nucleus_accumbens_basal_ganglia Esophagus_Muscularis Nerve_Tibial

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