rs11113721 chr12:108078750 A>G
- Sequence
ccggaccaccttgaggaggcacta[A/G]tgtataatggacctgtggtctgag
- ASB in cell types
- GM18505 (female B-cells Lymphoblastoid Cell Lines) GM19240 (B cells Lymphoblastoid Cell Lines) GM19193 (female B-cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -2.34 | 3.25 | 1.20 | 0.64 | Weak Concordant | |||
| STAG1_HUMAN | -1.41 | 2.75 | 1.25 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
