rs11115185 chr12:82089966 T>C

Sequence
tatttgcgcagctgataatatgac[T/C]cagattccaaacgttccttttcag
ASB in cell types
22RV1 (prostate carcinoma) breast tumor
ASB for transcription factors
ANDR_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.27 -5.44 4.2·10-51.00 2.00 n/a No Hit
ESR1_HUMAN 2.84 n/a 5.4·10-31.00 2.00 4.07 Discordant
Items per page:
1 – 2 of 2

Motif analysis

ESR1_HUMAN Discordant
ESR1_HUMAN pic

Genetic associations

GRASP bipolar disorder,  body mass index (bmi),  chronic kidney disease,  total cholesterol,  years of education

Download