rs11115342 chr12:82682952 C>T
- Sequence
tgacgaccaggaccagatgtggat[C/T]tttagttaatatttatgcaacacc
- ASB in cell types
- LNCaP (prostate carcinoma) breast tumor breast tumor xenograft
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.29 | -0.48 | 1.50 | -0.86 | Weak Concordant | |||
| ANDR_HUMAN | 1.33 | -0.19 | 1.46 | n/a | No Hit | |||
| ESR1_HUMAN | 2.67 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
