rs11118982 chr1:208090635 G>A
- Sequence
atgcccttgcttcagctgcaggtc[G/A]ctttcaggcttggctttgggtttc
- ASB in cell types
- SK-BR-3 (breast adenocarcinoma)
- ASB for transcription factors
- ERR1_HUMAN PKNX1_HUMAN GLIS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERR1_HUMAN | -0.69 | 2.15 | 1.10 | 2.75 | Concordant | |||
| PKNX1_HUMAN | 1.64 | -3.26 | 1.75 | n/a | No Hit | |||
| GLIS1_HUMAN | 1.74 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
