rs11120538 chr1:215267687 A>C
- Sequence
cccaggatctcatcatttccatta[A/C]aatcagaaattccatctcagttat
- ASB in cell types
- T47D (invasive ductal carcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN GCR_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.16 | 2.92 | 1.67 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.57 | 2.91 | 3.39 | n/a | No Hit | |||
| GCR_HUMAN | -0.56 | 1.89 | 1.12 | n/a | No Hit | |||
| BRD4_HUMAN | n/a | 2.39 | 2.00 | n/a | n/a |
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