rs11121181 chr1:8416946 G>A

Sequence
cagtgatgagagtgctggcctgag[G/A]agcacactgtgagcagtgaggata
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.18 -0.13 0.031.00 1.67 0.28 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP glaucoma (high pressure glaucoma),  glaucoma (primary open-angle glaucoma),  hip bone mineral density (bmd),  spine bone mineral density (bmd)
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid,  Whole_Blood

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