rs11121529 chr1:10211630 C>G
- Sequence
gtgggggttgggaggctgcttgag[C/G]aagctagtcattgttcatgcaaca
- ASB in cell types
- 22RV1 (prostate carcinoma) liver HEK293 (embryonic kidney) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- ANDR_HUMAN CEBPB_HUMAN TYY1_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.80 | -5.22 | 2.50 | n/a | No Hit | |||
| CEBPB_HUMAN | 1.70 | -1.04 | 1.67 | -3.37 | Concordant | |||
| TYY1_HUMAN | 1.61 | 0.47 | 1.83 | n/a | No Hit | |||
| TCF21_HUMAN | 2.43 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
