rs11121817 chr1:11741030 G>A

Sequence
gctctgaagataaagatcagaatc[G/A]tcctcatgcccagccctgcctgcc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN REQU_HUMAN EP400_HUMAN HDAC2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN 1.65 -1.65 9.6·10-71.00 1.00 n/a n/a
REQU_HUMAN 2.13 0.79 5.9·10-41.00 1.08 n/a n/a
EP400_HUMAN 2.63 -2.29 3.7·10-31.00 1.00 n/a n/a
HDAC2_HUMAN 1.94 -0.77 5.4·10-31.00 1.00 n/a n/a
GATA2_HUMAN 1.63 0.18 7.8·10-31.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  birth weight,  fasting insulin,  homa-b,  homa-ir,  microalbuminuria,  systolic blood pressure (sbp)
GTEx eQTL Artery_Aorta,  Esophagus_Mucosa,  Muscle_Skeletal,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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