rs11124030 chr2:105404011 G>T
- Sequence
accctgtggtggggtcgtgggggg[G/T]aggctggtgggctagacccatctg
- ASB in cell types
- breast tumor
- ASB for transcription factors
- GLIS1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | -2.15 | 2.71 | 1.25 | 2.94 | Concordant | |||
| ESR1_HUMAN | 2.72 | -2.99 | 2.00 | n/a | No Hit |
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Motif analysis
