rs11124446 chr2:35503876 T>A

Sequence
ataaatctgaatcactggccttaa[T/A]cacttaactattgagaacttatgt
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN TF65_HUMAN NOTC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 1.86 -0.07 3.3·10-31.00 1.05 n/a No Hit
TF65_HUMAN 2.77 n/a 6.3·10-31.00 3.00 n/a No Hit
NOTC1_HUMAN 2.28 n/a 0.041.00 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol lp-pla2 mass total cholesterol

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