rs11124908 chr2:42975447 C>T
- Sequence
ctctgtccctgttgcccttcctgt[C/T]ttcctccagccctccagtcctgct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) neutrophils from periferal blood GM12891 (male B- cells lymphoblastoid cell line) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.85 | -0.38 | 1.30 | n/a | n/a | |||
| CTCF_HUMAN | 1.00 | 0.55 | 1.20 | n/a | No Hit |
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