rs11128522 chr3:10654351 C>A
- Sequence
tgtaacccagggcctacttagaac[C/A]ggacacataaaaggtcttgataaa
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERG_HUMAN | 2.06 | -1.61 | 1.00 | -1.80 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP hdl cholesterol, irritible bowel syndrome, rheumatoid arthritis, sporadic creutzfeldt-jakob disease