rs11129497 chr3:32145584 A>G
- Sequence
ggctggattaaagtgacttgaggg[A/G]ggggctggtctgcaatgttcagga
- ASB in cell types
- macrophages spleen
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.16 | -0.52 | 1.00 | 2.21 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Thyroid, Whole_Blood