rs11131882 chr4:178599692 A>G

Sequence
ttgtttagggaattttcagtgcta[A/G]gtcactgcctgccttttggctcta
ASB in cell types
HUES64 (embryonic stem cells) COLO-829 (melanoma) MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.43 1.60 1.001.8·10-6 1.61 n/a No Hit
RAD21_HUMAN -0.17 1.16 1.003.7·10-3 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  fasting blood glucose,  ldl cholesterol,  total cholesterol change with statins

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