rs11132208 chr4:183722942 G>A
- Sequence
gaacccagccgggccgcgccgcga[G/A]gaggctcccctgaggctggcagga
- ASB in cell types
- pancreas GM19240 (B cells Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.03 | 0.47 | 1.21 | -3.39 | Concordant |
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Motif analysis
