rs11135102 chr5:160438572 C>T

Sequence
gagggcacctcctgccttctcagt[C/T]agtcgcagcttcctctaatttgga
ASB in cell types
K562 (myelogenous leukemia) erythroid progenitors Peyer's patch hepatocytes
ASB for transcription factors
STAG1_HUMAN EZH2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.41 -0.49 1.1·10-51.00 1.00 n/a n/a
EZH2_HUMAN 1.69 1.05 0.030.80 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP paternal transmission distortion recurrent early onset major depressive disorder recurrent early onset major depressive disorder (females)
GTEx eQTL Artery_Tibial Muscle_Skeletal Ovary Skin_Sun_Exposed_Lower_leg

Download