rs11135696 chr8:23084410 A>G

Sequence
cagccacagtcctggagaggcctg[A/G]gcctgaacaacatggcttccccca
ASB in cell types
IMR-5 (Neuroblastoma) foreskin keratinocyte spleen adrenal gland
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Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
IMR-5 (Neuroblastoma) 3.51 n/a 2.7·10-51.00 2.00
foreskin keratinocyte n/a 0.65 1.001.7·10-3 2.83
spleen -0.40 1.07 1.008.2·10-3 1.11
adrenal gland -0.70 1.37 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

GRASP refractive error
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Aorta,  Artery_Tibial,  Brain_Cortex,  Brain_Hypothalamus,  Brain_Putamen_basal_ganglia,  Brain_Substantia_nigra,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Minor_Salivary_Gland,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Small_Intestine_Terminal_Ileum,  Thyroid,  Whole_Blood

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