rs11135703 chr8:23163833 G>A
- Sequence
agacgacgaacttaaggatcttgg[G/A]gtccaggagccatggtctggttcc
- ASB in cell types
- GM18505 (female B-cells Lymphoblastoid Cell Lines) LNCaP C4-2 (prostate carcinoma) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- EPAS1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EPAS1_HUMAN | 0.85 | 2.03 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.69 | 0.92 | 1.06 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood