rs11135829 chr8:24840539 G>C

Sequence
aaactaacaaacagaaaggacatc[G/C]acaccaaaaacccacctgtacatc
ASB in cell types
WA01 (H1, human embryonic stem cells)
ASB for transcription factors
TIF1B_HUMAN ZN486_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TIF1B_HUMAN 2.35 -1.88 0.011.00 1.00 n/a n/a
ZN486_HUMAN 1.70 -0.56 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia Brain_Putamen_basal_ganglia Esophagus_Mucosa

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