rs11136539 chr8:2733935 G>C
- Sequence
ggaagttcttctttgccgttttcc[G/C]cttatcagcgtgcatctggcgata
- ASB in cell types
- K562 (myelogenous leukemia) renal cortex
- ASB for transcription factors
- MTG16_HUMAN SUMO2_HUMAN HES1_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | n/a | 0.58 | 2.00 | n/a | n/a | |||
| SUMO2_HUMAN | -0.97 | 2.26 | 2.00 | n/a | n/a | |||
| HES1_HUMAN | n/a | 2.88 | 2.00 | n/a | No Hit | |||
| CREB1_HUMAN | 1.75 | 0.26 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Thyroid